The RNA & T Cell Laboratory works in two general research areas. Firstly, we are interested in the molecular mechanisms that control immune cell development. The immune system is comprised of a diverse range of cell types, and each type must be replenished continuously in appropriate numbers and with appropriate functional properties. This ensures that immunity against potential infections is maintained while inappropriate immune responses are suppressed. Any defect in this balance can result in susceptibility to infection or cancer, or the development of autoimmune disease.
Secondly, we are interested in the biogenesis and function of non-coding RNAs. We study how these RNAs are transcribed and processed so they can generate functional molecules. We are also interested in understanding the regulation of the microRNA machinery.
Current research projects
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Regulation of T cell development
Appropriate development of T cells in the T cells is essential for a functional immune system. Defects in T cell development can not only result in impaired immunity but can lead to autoimmune disease, like type 1 diabetes, or cancer, especially T-cell acute lymphoblastic leukaemia.
We are interested in uncovering the gene regulatory programs that control T cell development, particularly during the stages known as CD4-CD8- double negative. We are also interested in understanding the roles of specific antigen presenting cells guiding the T cell development.
To investigate T cell development, we employ the latest next generation ‘omics technologies, such as single cell RNA sequencing, that allow us to analyse cells at unparalleled resolution. Gene manipulation technologies, such as RNAi, CRISPR and GM mice then enable us to probe the requirement of identified pathways.
Specific topics include:
- Function of thymic-specific antigen presenting cells.
- T lineage identity and the intersection with leukemogenesis.
- Single cell RNA sequencing approaches to interrogate T cell development.
ImmunotherapiesIt is increasingly clear that the immune system interacts with many disease processes, including those that are not conventionally thought of involving the immune system, such as metabolic dysregulation and type 2 diabetes. Abnormalities or even mild immune deficiencies can have important consequences, such as an individual’s susceptibility to autoimmune disease or the likelihood of a cancer patient responding to treatments. Because of this interaction with the immune system, this provides opportunities to develop disease treatments that target or engage the specific immune cell. These are commonly known as immunotherapies.
Our lab is interested in developing new immunotherapies for treating either autoimmune disease or cancer, and in particular, we have a long-standing interest in RNA-based technologies.
Current research topics include:
- mRNA vaccines to induce tolerance in autoimmune disease.
- microRNA inhibitors to modify disease processes.
- Regulatory T cell-targeting drugs.
People
Available for Student Supervision
- Jarrod Skinner, Research Assistant
- Yangnan Zhang, PhD students
- Le Wei Wong, PhD student
- Jieying Lin, Masters student
- Runwei Lyu, Masters student
- Shuo Jiang, Masters student
Student Projects
Defects in the thymic microenvironment as the cause of T-cell acute lymphoblastic leukaemia
Lab: RNA & T Cell Biology
Supervisor(s): Associate Professor Mark Chong
Diseases focus: CancerRegulation of ILC function and intestinal homeostasis by Coronin 2b
Lab: RNA & T Cell Biology
Supervisor(s): Associate Professor Mark Chong
Diseases focus: ImmunologySelected publications
Leong KW & Chong MMW (2025) Regulation of the microprocessor by post-translational modifications, Front Cell Dev Biol, 13, 1721087.
Wang Y, Liu X, Bond AC, Oh S, Ochiai S, Larson AR, Qualls AE, Sun IH, Chopin M, Gardner JM, Nutt SL, Ronchese F, Pellicci DG & Chong MMW (2025), Unexpected heterogeneity and tissue-specific properties of the thymic hematopoietic antigen–presenting cell network, Proc Natl Acad Sci USA, 122: e2508184122.
Trang TT & Chong MMW (2025), Regulation of actin cytoskeletal dynamics in T cell development and function, Front Immunol, 16: 1622928.
Gu K, Mok L, Wakefield MJ & Chong MMW (2024), Non-canonical RNA substrates of Drosha lack many of the conserved features found in primary microRNA stem-loops, Sci Rep, 14:6713.
Oh S, Parikh D, Xiao J, Liu X, Gu K & Chong MMW (2023), Mapping the two distinct proliferative bursts early in T cell development, Immunol Cell Biol, 101:766-774.
Oh S, Liu X, Tomei S, Luo M, Skinner JP, Berzins SP, Naik SH, Gray DHD & Chong MMW (2023), Distinct subpopulations of DN1 thymocytes exhibit preferential γδ T lineage potential, Front Immunol, 14:1106652.
ORCID profile: orcid.org/0000-0002-3701-7397
Google Scholar profile: https://scholar.google.com.au/citations?user=poeNg8gAAAAJ&hl=en
Related News
Discovery opens door for new cancer drugs
Associate Professor Mark Chong is leading a project – supported by a $50,000 Tour de Cure grant – to develop a new class of drugs to inhibit certain microRNAs within the immune system as a novel immunotherapy to treat cancer.
mRNA research could be key to type 1 diabetes treatment
A team led by SVI’s Associate Professor Mark Chong, has been awarded a two-year grant from the Victorian Government’s new mRNA Research Acceleration Fund to push forward development of an Australian-first mRNA-based treatment for type 1 diabetes.